{
  "id": 335758,
  "title": "Preprocessing Starter Code from Organizers [CAII, Mayo Clinic]",
  "url": "/competitions/mayo-clinic-strip-ai/discussion/335758",
  "author_name": "VikashGupta",
  "post_date": "2022-07-07T18:13:26.419000",
  "votes": 14,
  "comment_count": 4,
  "views": 0,
  "content": "<p>Hi all, <br>\nHere is a docker image that you all can use for reading your images and generating patches and tiles for training.</p>\n<p>docker pull vikash112/pathology</p>\n<p>In case you run into issues please post here. This code is built using <a href=\"https://monai.io/\" target=\"_blank\">MONAI</a></p>",
  "messages": [
    {
      "id": 1847224,
      "postDate": "2022-07-07T18:13:26.420Z",
      "content": "<p>Hi all, <br>\nHere is a docker image that you all can use for reading your images and generating patches and tiles for training.</p>\n<p>docker pull vikash112/pathology</p>\n<p>In case you run into issues please post here. This code is built using <a href=\"https://monai.io/\" target=\"_blank\">MONAI</a></p>",
      "rawMarkdown": "Hi all, \nHere is a docker image that you all can use for reading your images and generating patches and tiles for training.\n\ndocker pull vikash112/pathology\n\nIn case you run into issues please post here. This code is built using [MONAI](https://monai.io/)",
      "votes": 14
    },
    {
      "id": 1849818,
      "postDate": "2022-07-09T20:29:20.960Z",
      "content": "<p>You can crop large images into small slices which are more manageable and then get rid of the background portions to train a final classifier. I have uploaded a notebook and a dataset on this topic.</p>\n<p>Good luck! 🍀</p>",
      "rawMarkdown": "You can crop large images into small slices which are more manageable and then get rid of the background portions to train a final classifier. I have uploaded a notebook and a dataset on this topic.\n\nGood luck! 🍀"
    },
    {
      "id": 1848284,
      "postDate": "2022-07-08T13:47:52.910Z",
      "content": "<p>I will upload a github repo with some code today </p>",
      "rawMarkdown": "I will upload a github repo with some code today "
    },
    {
      "id": 1847687,
      "postDate": "2022-07-08T04:47:31.030Z",
      "content": "<p>Could you please tell me a little more about how to use this docker image?</p>\n<p>Or, could you update <a href=\"https://www.kaggle.com/code/vikash112/preprocessing-data\" target=\"_blank\">this notebook</a>?</p>",
      "rawMarkdown": "Could you please tell me a little more about how to use this docker image?\n\nOr, could you update [this notebook](https://www.kaggle.com/code/vikash112/preprocessing-data)?"
    },
    {
      "id": 1847240,
      "postDate": "2022-07-07T18:28:18.300Z",
      "content": "<p>Thanks, Vikash!</p>",
      "rawMarkdown": "Thanks, Vikash!"
    }
  ],
  "comments": [
    {
      "id": 1849818,
      "author_name": "moth",
      "author_url": "",
      "post_date": "2022-07-09T20:29:20.960000",
      "content": "<p>You can crop large images into small slices which are more manageable and then get rid of the background portions to train a final classifier. I have uploaded a notebook and a dataset on this topic.</p>\n<p>Good luck! 🍀</p>",
      "votes": 0,
      "replies": []
    },
    {
      "id": 1848284,
      "author_name": "VikashGupta",
      "author_url": "",
      "post_date": "2022-07-08T13:47:52.910000",
      "content": "<p>I will upload a github repo with some code today </p>",
      "votes": 0,
      "replies": []
    },
    {
      "id": 1847687,
      "author_name": "Yoshio Sugiyama",
      "author_url": "",
      "post_date": "2022-07-08T04:47:31.030000",
      "content": "<p>Could you please tell me a little more about how to use this docker image?</p>\n<p>Or, could you update <a href=\"https://www.kaggle.com/code/vikash112/preprocessing-data\" target=\"_blank\">this notebook</a>?</p>",
      "votes": 0,
      "replies": []
    },
    {
      "id": 1847240,
      "author_name": "Barbaros",
      "author_url": "",
      "post_date": "2022-07-07T18:28:18.300000",
      "content": "<p>Thanks, Vikash!</p>",
      "votes": 0,
      "replies": []
    }
  ],
  "raw_markdown_by_id": {
    "1847224": "Hi all, \nHere is a docker image that you all can use for reading your images and generating patches and tiles for training.\n\ndocker pull vikash112/pathology\n\nIn case you run into issues please post here. This code is built using [MONAI](https://monai.io/)",
    "1849818": "You can crop large images into small slices which are more manageable and then get rid of the background portions to train a final classifier. I have uploaded a notebook and a dataset on this topic.\n\nGood luck! 🍀",
    "1848284": "I will upload a github repo with some code today ",
    "1847687": "Could you please tell me a little more about how to use this docker image?\n\nOr, could you update [this notebook](https://www.kaggle.com/code/vikash112/preprocessing-data)?",
    "1847240": "Thanks, Vikash!"
  }
}