{"metadata":{"kernelspec":{"language":"python","display_name":"Python 3","name":"python3"},"language_info":{"pygments_lexer":"ipython3","nbconvert_exporter":"python","version":"3.6.4","file_extension":".py","codemirror_mode":{"name":"ipython","version":3},"name":"python","mimetype":"text/x-python"}},"nbformat_minor":4,"nbformat":4,"cells":[{"cell_type":"markdown","source":"# Reading train.csv","metadata":{}},{"cell_type":"code","source":"import pandas as pd\ndf_train = pd.read_csv(\"/kaggle/input/rsna-2023-abdominal-trauma-detection/train.csv\")\ndf_train.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.702607Z","iopub.execute_input":"2023-08-25T11:08:44.703161Z","iopub.status.idle":"2023-08-25T11:08:44.781078Z","shell.execute_reply.started":"2023-08-25T11:08:44.703117Z","shell.execute_reply":"2023-08-25T11:08:44.780156Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading sample_submission.csv","metadata":{}},{"cell_type":"code","source":"import pandas as pd\ndf_submission = pd.read_csv(\"/kaggle/input/rsna-2023-abdominal-trauma-detection/sample_submission.csv\")\ndf_submission.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.783152Z","iopub.execute_input":"2023-08-25T11:08:44.784553Z","iopub.status.idle":"2023-08-25T11:08:44.814997Z","shell.execute_reply.started":"2023-08-25T11:08:44.784503Z","shell.execute_reply":"2023-08-25T11:08:44.812964Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading train_series_meta.csv","metadata":{}},{"cell_type":"code","source":"import pandas as pd\ndf_train_series_meta = pd.read_csv(\"/kaggle/input/rsna-2023-abdominal-trauma-detection/train_series_meta.csv\")\ndf_train_series_meta.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.816871Z","iopub.execute_input":"2023-08-25T11:08:44.817302Z","iopub.status.idle":"2023-08-25T11:08:44.840877Z","shell.execute_reply.started":"2023-08-25T11:08:44.81727Z","shell.execute_reply":"2023-08-25T11:08:44.838689Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading df_test_series_meta.csv","metadata":{}},{"cell_type":"code","source":"import pandas as pd\ndf_test_series_meta = pd.read_csv(\"/kaggle/input/rsna-2023-abdominal-trauma-detection/test_series_meta.csv\")\ndf_test_series_meta.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.84251Z","iopub.execute_input":"2023-08-25T11:08:44.842882Z","iopub.status.idle":"2023-08-25T11:08:44.862116Z","shell.execute_reply.started":"2023-08-25T11:08:44.842857Z","shell.execute_reply":"2023-08-25T11:08:44.861005Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading image_level_labels.csv","metadata":{}},{"cell_type":"code","source":"import pandas as pd\ndf_image_level_labels = pd.read_csv(\"/kaggle/input/rsna-2023-abdominal-trauma-detection/image_level_labels.csv\")\ndf_image_level_labels.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.86591Z","iopub.execute_input":"2023-08-25T11:08:44.867273Z","iopub.status.idle":"2023-08-25T11:08:44.899089Z","shell.execute_reply.started":"2023-08-25T11:08:44.86714Z","shell.execute_reply":"2023-08-25T11:08:44.897689Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading train_dicom_tags.parquet","metadata":{}},{"cell_type":"code","source":"df_train_dicom_tags = pd. read_parquet('/kaggle/input/rsna-2023-abdominal-trauma-detection/train_dicom_tags.parquet', engine='pyarrow')\ndf_train_dicom_tags.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:44.901351Z","iopub.execute_input":"2023-08-25T11:08:44.902502Z","iopub.status.idle":"2023-08-25T11:08:50.92589Z","shell.execute_reply.started":"2023-08-25T11:08:44.902455Z","shell.execute_reply":"2023-08-25T11:08:50.924904Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading test_dicom_tags.parquet","metadata":{}},{"cell_type":"code","source":"df_test_dicom_tags = pd. read_parquet('/kaggle/input/rsna-2023-abdominal-trauma-detection/test_dicom_tags.parquet', engine='pyarrow')\ndf_test_dicom_tags.tail(3)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:08:50.927548Z","iopub.execute_input":"2023-08-25T11:08:50.927925Z","iopub.status.idle":"2023-08-25T11:08:50.965659Z","shell.execute_reply.started":"2023-08-25T11:08:50.92789Z","shell.execute_reply":"2023-08-25T11:08:50.964291Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading a .dcm File","metadata":{}},{"cell_type":"code","source":"import matplotlib.pyplot as plt\nimport pydicom\nfrom pydicom.data import get_testdata_files\nimg_path= \"/kaggle/input/rsna-2023-abdominal-trauma-detection/train_images/26501/22032/12.dcm\"\n\ndcm_img = pydicom.dcmread(img_path, force=True)\nimg_array = dcm_img.pixel_array\n\nplt.imshow(img_array)","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:13:38.003449Z","iopub.execute_input":"2023-08-25T11:13:38.003846Z","iopub.status.idle":"2023-08-25T11:13:38.309108Z","shell.execute_reply.started":"2023-08-25T11:13:38.003812Z","shell.execute_reply":"2023-08-25T11:13:38.307816Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Reading a .nii Files","metadata":{}},{"cell_type":"code","source":"import nibabel as nib\nimport numpy as np\nimport matplotlib.pyplot as plt\n\ntest_load = nib.load('/kaggle/input/rsna-2023-abdominal-trauma-detection/segmentations/10109.nii').get_fdata()\ntest_load.shape\ntest = test_load[:,:,59]\nplt.imshow(test)\nplt.show()","metadata":{"execution":{"iopub.status.busy":"2023-08-25T11:26:31.222072Z","iopub.execute_input":"2023-08-25T11:26:31.22247Z","iopub.status.idle":"2023-08-25T11:26:34.500284Z","shell.execute_reply.started":"2023-08-25T11:26:31.22244Z","shell.execute_reply":"2023-08-25T11:26:34.498655Z"},"trusted":true},"execution_count":null,"outputs":[]},{"cell_type":"markdown","source":"# Thank You!","metadata":{}}]}