{"cells":[{"metadata":{},"cell_type":"markdown","source":"taking help from here: https://www.kaggle.com/krishnakalyan3/pe-detection-eda-with-fastai\n\nneed to put in the actual model but here is how to extract dcm:"},{"metadata":{"_uuid":"8f2839f25d086af736a60e9eeb907d3b93b6e0e5","_cell_guid":"b1076dfc-b9ad-4769-8c92-a6c4dae69d19","trusted":true},"cell_type":"code","source":"import pydicom as dcm\nimport matplotlib.animation as animation\nimport random, os\nimport numpy as np\nimport torch\nfrom fastai.vision.all import *\nfrom fastai.medical.imaging import *","execution_count":null,"outputs":[]},{"metadata":{"_uuid":"d629ff2d2480ee46fbb7e2d37f6b5fab8052498a","_cell_guid":"79c7e3d0-c299-4dcb-8224-4455121ee9b0","trusted":true},"cell_type":"code","source":"path = Path('../input/rsna-str-pulmonary-embolism-detection/')\nfname = path/ \"train\" /\"0003b3d648eb\"/ \"d2b2960c2bbf\" / \"00ac73cfc372.dcm\"","execution_count":null,"outputs":[]},{"metadata":{"trusted":true},"cell_type":"code","source":"fname_dcm = fname.dcmread();fname_dcm","execution_count":null,"outputs":[]},{"metadata":{"trusted":true},"cell_type":"code","source":"dcm = fname.dcmread()\ndcm.show(scale=False)","execution_count":null,"outputs":[]},{"metadata":{"trusted":true},"cell_type":"code","source":"dcm.show()","execution_count":null,"outputs":[]},{"metadata":{"trusted":true},"cell_type":"code","source":"dcm.show(cmap=\"spring_r\", figsize=(6,6))","execution_count":null,"outputs":[]},{"metadata":{"trusted":true},"cell_type":"code","source":"","execution_count":null,"outputs":[]}],"metadata":{"kernelspec":{"language":"python","display_name":"Python 3","name":"python3"},"language_info":{"pygments_lexer":"ipython3","nbconvert_exporter":"python","version":"3.6.4","file_extension":".py","codemirror_mode":{"name":"ipython","version":3},"name":"python","mimetype":"text/x-python"}},"nbformat":4,"nbformat_minor":4}